• 云顶集团3118(中国)

    Modelling protocols for derivation of Fe(III) NICA constants and calculations of ambient Fe speciation and apparent Fe(III) solubility in seawater

    Kechen Zhu, Jan E. Groenenberg, Eric P. Achterberg, Martha Gledhill

    Published: 2022-07-11 DOI: 10.17504/protocols.io.brc4m2yw
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    Abstract

    Calculations of iron (Fe) speciation using the NICA-Donnan model can be useful for development of an understanding of the physico-chemical parameters (e.g. temperature, pH) that can influence Fe speciation in seawater (Hiemstra and van Riemsdjik. 2006; Gledhill et al. 2015; Avendano et al. 2016). Here we archive a protocol that can be used to calculate Fe speciation in seawater and derive new NICA constants for Fe binding to marine DOM, in combination with appropriately designed titration experiments. Importantly, for derivation of NICA constants, a pH dimension of sufficient resolution and breadth must be included in the experimental design. The protocol combines the chemical software ORCHESTRA with parameter estimation program PEST and was first described by (Janot et al. 2017) to successfully derive NICA constants for Cd and Zn binding to standard Laurentian Fulvic acid.

    Before start

    1. The Java program must be installed on your computer.

    2. Calculations via chemical speciation software ORCHESTRA can be performed on Windows, Linux and Apple OSX, but the combination of PEST-ORCHESTRA can only be performed using Windows. We have only applied the software in Windows and the manual we have written is thus relevant to Windows and may not be applicable to use on Apple OSX or Linux.

    Attachments

    PEST-ORCHESTRA.zip

    Steps

    The application of PEST-ORCHESTRA to the estimation of NICA-Donnan parameters in seawater

    1.

    Install chemical speciation software ORCHESTRA and parameter estimation program PEST

    Software

    ValueLabel
    ORCHESTRANAME
    Hans MeeussenDEVELOPER
    http://orchestra.meeussen.nl/LINK
    2020VERSION

    Software

    ValueLabel
    PEST: Model-Independent Parameter Estimation and Uncertainty AnaNAME
    John DohertyDEVELOPER
    http://pesthomepage.org/LINK
    version 17.1 ofVERSION
    2.

    Set up the calculation in ORCHESTRA

    Note
    Please check the manual in the attachment.

    3.

    Test the calculation in ORCHESTRA

    4.

    Set up the combination of PEST-ORCHESTRA

    Note
    Please check the Manual in the attachment.

    5.

    Derive NICA constants for Fe binding to marine dissolved organic matter

    Note
    Please check example files in the attachment.

    6.

    Check the results for optimization of Fe(III) NICA constants

    Note
    Please check the manual in the attachment.

    Calculations of ambient Fe speciation and apparent Fe(III) solubility using the NICA-Donnan model in seawater

    7.

    Calculations of ambient Fe speciation via ORCHESTRA

    Note
    An example calculation with original source code is provided in the attachment.

    8.

    Calculations of apparent Fe(III) solubility via ORCHESTRA

    Note
    An example calculation within original source code is provided in the attachment.

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